inital commit. basic heatmap generator. still have to make many options configurable.

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gabriel venberg 2021-03-02 14:07:44 -06:00
commit 36e083eee0
2 changed files with 257 additions and 0 deletions

146
.gitignore vendored Normal file
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111
outputHightMap.py Executable file
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#! /usr/bin/env python3
#command line arguments:
# --help, -h, outputs usage of the program
# -x, -y, outputs width and hight of the output image
# --output, -o, name of output file. if there are multiple input files, there will be a number prepended to this.
# after all comamnd line arguments, file or files(space seperated) to process.
import numpy as np
import sys, argparse, laspy, logging
import seaborn as sns; sns.set_theme()
import matplotlib.pyplot as plt
from PIL import Image
logging.basicConfig(format='%(levelname)s:%(message)s', level=logging.INFO)
imgX=100
imgY=100
#TODO: make it iterate over multiple files.
inFile = sys.argv[1]
lasFile = laspy.file.File(inFile, mode = "r")
#import each dimention scaled.
x = lasFile.x
y = lasFile.y
z = lasFile.z
maxes = np.array(lasFile.header.max)*np.array(lasFile.header.scale)
mins = np.array(lasFile.header.min)*np.array(lasFile.header.scale)
logging.debug(f'max values is {maxes}')
logging.debug(f'min values is {mins}')
intensity = lasFile.intensity
#dimention that will be z(top down) dimention in final heatmap. TODO: auto detect this based on dimention with least variance.
zDim=0
xDim=1
yDim=2
points = np.stack((x,y,z,intensity), axis=-1)
#points should now look like
#[[x,y,z,intensity]
# [x,y,z,intensity]
# ...
# [x,y,z,intensity]
# [x,y,z,intensity]]
logging.debug(f'points is\n{points}')
xRange = maxes[xDim]-mins[xDim]
yRange = maxes[yDim]-mins[yDim]
zRange = maxes[zDim]-mins[zDim]
def sort(array):
#sort by zDim column, first to last.
logging.debug(f'zDim sliced points is\n{array[:,zDim]}')
#the [::-1] reverses the resulting array, so that sortedPoints will be from biggest to smallest.
ind = np.argsort(array[:,zDim])[::-1]
sortedPoints = array[ind]
logging.debug(f'sortedPoints is\n{sortedPoints}')
return sortedPoints
sortedPoints = sort(points)
imageArray = np.zeros((imgX, imgY))
def scale(array, xRange, yRange, maxX, maxY):
logging.debug(f'xRange is {xRange} and yRange is {yRange}')
xScale = maxX/xRange
yScale = maxY/yRange
scaledArray = sortedPoints[:, 0:3]
scaledArray[:,xDim]=scaledArray[:,xDim]-mins[xDim]
scaledArray[:,xDim]=scaledArray[:,xDim]*xScale
logging.debug(f'xmin in scaledArray is {scaledArray[:,xDim].min()}')
logging.debug(f'xmin in scaledArray is {scaledArray[:,xDim].max()}')
scaledArray[:,yDim]=scaledArray[:,yDim]-mins[yDim]
scaledArray[:,yDim]=scaledArray[:,yDim]*yScale
logging.debug(f'ymin in scaledArray is {scaledArray[:,yDim].min()}')
logging.debug(f'ymin in scaledArray is {scaledArray[:,yDim].max()}')
logging.debug(f'scaledArray is\n{scaledArray}')
return scaledArray
scaledArray = scale(points, xRange, yRange, imgX, imgY)
def isInxyRange(xMin, xMax, yMin, yMax, xVal, yVal):
return (xMin<=xVal) and (xVal<xMax) and (yMin<=yVal) and (yVal<yMax)
for x in range(imgX):
for y in range(imgY):
if x==imgX:
xMax=x+2
else:
xMax=x+1
if y==imgY:
yMax=y+2
else:
yMax=y+1
zVal=0
logging.debug(f'yMax is {yMax} and xMax is {xMax}')
for i in range(scaledArray.shape[0]):
if isInxyRange(x, xMax, y, yMax, scaledArray[i,xDim], scaledArray[i,yDim]):
zVal = scaledArray[i,zDim]
break;
imageArray[x,y]=zVal
logging.info(f'zVal at {x},{y} is {zVal}')
logging.debug(f'imageArray is {imageArray}')
heatMap = sns.heatmap(imageArray, center=((maxes[zDim]+mins[zDim])/2), square=True)
heatMapFig = heatMap.get_figure()
heatMapFig.savefig("output.png")